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Research
Areas
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Gene
Expression and Regulation
Gene expression may change in response to physical signals from the environment, interactions between species, and signals within an organism. Regulatory mechanisms operate at many levels: through alterations in DNA (chromatin) structure, modification of transcription, stability, or translation of mRNA, or alterations in protein activity through post-translational modification. These mechanisms are studied in laboratories at MSU using state-of-the-art methodologies coupled with classical methods to more fully understand the processes of gene regulation. It is the combination of these strategies that is the strength of this group. The
approaches to study gene expression and regulation vary from the atomic
level to the molecular level to the population level, and this depth
of examination is reflected in the research groups composing this area
of the MSU Genetics Program. Techniques of biochemistry, microbiology,
molecular biology, and genomics, are used in the study of such varied
areas as genetic and infectious diseases of animals (Ewart, Mansfield,
Mulks), humans (Arvidson, Bagdasarian, Mansfield, Triezenberg), and
plants (Allison, Howe, Sticklen, Trail, Walton); cancer (Esselman, Fluck,
Kopachik, McCormick, Schwartz, Zacharewski), development (Arnosti, Champness,
Kende, Kroos, vanNocker), bioremediation (Reddy, Rugh), and microbial
ecology (Schmidt, Thomashow). Nutrition and improvement of crop production
is a prominent area studied at all levels by a large number of researchers
(Della Penna, Han, Nadler, Ohlrogge, Sticklen,). The research also encompasses
basic cellular processes such as transcription (Burton, Geiger, Jump,
Kuo, Thomashow, Triezenberg), post-transcriptional RNA modification
(Koslowsky, Patterson), translation (Snyder), and organelle division
(Osteryoung). Specialized classes and research opportunities are offered
through the Gene Expression in Disease and Development focus group,
composed of members of the Genetics Program whose research is concentrated
on identifying basic mechanisms of transcriptional control (www.bch.msu.edu/GEDD). |
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FACULTY NAME |
RESEARCH DESCRIPTION |
| control of plant viral multiplication and gene expression | |
| David Arnosti | transcriptional repression and Drosophila development |
| Cindy Arvidson | gene expression during bacterial pathogenesis |
| Michael Bagdasarian | gene expression during bacterial pathogenesis |
| Robert Britton | Genomics of prokaryotic chromatin remodeling factors, gene expression mechanisms in Lactobacillus sp. |
| Zachary Burton | eukaryotic transcription mechanisms |
| Wendy Champness | controls of gene expression during bacterial development, antibiotic production |
| Christina Chan | Apply system biology approaches to reconstruct signaling and gene regulatory pathways to help elucidate disease mechanisms and identify pharmaceutical targets |
| Jose Cibelli | genetic pluripotency of animals examined through nuclear transplantation and cloning |
| Todd Ciche | gene regulation controlling symbiosis and pathogenesis of bacteria, nematodes, and their insect hosts |
| Dean Della Penna | gene expression for cell wall synthesis and secondary metabolite production |
| Catherine Ernst | Developmental and nutritional regulation of gene expression in animals |
| Walter Esselman | tyrosine phosphatases in signaling, cell cycle and transformation, differentiation and activation of lymphocytes. |
| Susan Ewart | variations in gene expression in inherited diseases of animals |
| David R. Foran | development and gene expression of forensically useful flies |
| Michele Fluck | polyoma virus as a model to study the interactions of a virus with its host cells, persistence and tumorigenesis |
| Jim Geiger | structural details of eukaryotic transcription initiation |
| Kyung-Hwan Han | plant gene expression |
| Sandra Haslam | role of epithelial-stromal cell interactions and tissue microenvironment in normal and cancerous breast development and growth regulation |
| R. William Henry | RNA polymerase and transcriptional control |
| Gregg Howe | gene expression during plant-insect interactions, plant resistance mechanisms |
| Jianping Hu | regulatory mechanisms controlling peroxisomal gene expression. |
| Marianne Huebner | statistical issues in the design and analysis of microarray experiments; gene regulatory networks. |
| Donald Jump | polyunsaturated fatty acids (PUFA) effects on liver gene expression via transcription factors |
| Hans Kende | genetics of plant growth and development, as controlled by plant hormones |
| Will Kopachik | transcriptional control of embryogenesis and tumorigenesis in the prostate |
| Lee Kroos | regulation of gene expression during development of the soil bacteria Bacillus subtilis and Myxococcus xanthus |
| Donna Koslowsky | RNA editing, mechanisms of regulation of mitochondrial gene expression in trypanosomes |
| Min-Hao Kuo | gene expression and other DNA-templated nuclear activities in the context of chromatin, transcriptional activation and dynamic chromatin modifications, in particular, histone acetylation. |
| Robert Larkin | influence of cholroplast development on nuclear gene expression |
| Laura McCabe | transcriptional regulation of bone formation under conditions of spaceflight, limb disuse, and disease states such as diabetes and osteoporosis. |
| Linda Mansfield | gene expression during bacterial pathogenesis |
| J. Justin McCormick | mechanisms by which normal human cells are transformed into tumor-producing, malignant cells |
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Molecular endocrinology and breast cancer; gene expression. |
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| Beronda Montgomery-Kaguri | molecular genetics of light-regulated growth and development in plants and cyanobacteria |
| Martha Mulks | gene expression during bacterial pathogenesis, animal disease |
| Ken Nadler | regulation of heme synthesis in the symbiotic Rhizobiumlegume root nodule |
| John Ohlrogge | regulation of fatty acid synthesis in plants |
| Katherine Osteryoung | controls of chloroplast division |
| Ronald Patterson | RNA splicing co-factor galectin-3. |
| C. A. Reddy | molecular mechanisms of regulation of secondary metabolism by filamentous fungi |
| Clayton Rugh | gene expression in phytoremediation, ability of plants to remove environmental pollutants |
| Thomas Schmidt | gene expression in microbial ecosystems |
| Richard Schwartz | transcriptional regulation of cytokines, differentiated function and differentiation in hejatopoietic cells; acetylation and transcription factor function |
| Larry Snyder | EF-Tu translation factor interaction with phage T4 protein in E. coli |
| Mariam Sticklen | controlling gene expression for improvement of cereal crops and turfgrass; plantpathogen interactions. |
| Michael Thomashow | molecular basis of adaptive response to low temperature and other abiotic stresses in plants and bacteria. |
| Frances Trail | genetics of fungal development with particular emphasis on sexual reproduction, sporulation, and pathogenicity |
| Steven Triezenberg | transcriptional activation in herpes simplex virus, transcriptional activation in plants |
| Bruce Uhal | Lung epithelial stem cell function; regulation of epithelial cell death (apoptosis); molecular mechanisms of lung fibrogenesis and repair. |
| Steve vanNocker | transcriptional control of flowering in Arabidopsis and corn |
| Jonathan Walton | histone acetylation as a key regulator in fungal-plant interactions |
| Tim Zacharewski | effects of estrogenic chemicals on gene expression, resulting in hormone-dependent cancers |